Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-glutamate ligase-like protein | EDC56_3854 | Not Available | Negative | 4308060 - 4309010 | 35052.5 |
| uncharacterized protein with transglutaminase domain | EDC56_3855 | Not Available | Negative | 4309021 - 4310562 | 56395.4 |
| hypothetical protein | EDC56_3856 | Not Available | Negative | 4310687 - 4311331 | 24034.2 |
| luxr family two component transcriptional regulator | EDC56_3857 | Not Available | Negative | 4311408 - 4312022 | 22823.7 |
| signal transduction histidine kinase | EDC56_3858 | Not Available | Positive | 4312233 - 4314938 | 99809.1 |
| pas domain s-box-containing protein | EDC56_3859 | Not Available | Positive | 4314935 - 4316473 | 56718.2 |
| carbon storage regulator csra | EDC56_3860 | Not Available | Negative | 4316495 - 4316695 | 7303.92 |
| hypothetical protein | EDC56_3861 | Not Available | Positive | 4316857 - 4317042 | 6983.8 |
| polar amino acid transport system substrate-binding protein | EDC56_3862 | Not Available | Positive | 4317039 - 4317824 | 29811.4 |
| hypothetical protein | EDC56_3863 | Not Available | Negative | 4317821 - 4318087 | 9979.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
