Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase / fumarate reductase membrane anchor subunit | EDC56_0304 | Not Available | Negative | 338371 - 338742 | 13864.2 |
| succinate dehydrogenase subunit c | EDC56_0305 | Not Available | Negative | 338739 - 339113 | 13158.6 |
| citrate synthase | EDC56_0306 | Not Available | Positive | 339599 - 340876 | 47735.3 |
| sodium/proton antiporter (nhaa family) | EDC56_0307 | Not Available | Negative | 341052 - 342428 | 48537.7 |
| tonb family protein | EDC56_0308 | Not Available | Negative | 342618 - 343808 | 43764.7 |
| hypothetical protein | EDC56_0309 | Not Available | Positive | 344198 - 344833 | 23444.3 |
| uncharacterized protein yaeq | EDC56_0310 | Not Available | Negative | 344853 - 345398 | 20650.0 |
| polyketide cyclase/dehydrase/lipid transport protein | EDC56_0311 | Not Available | Positive | 345429 - 345878 | 16932.1 |
| hypothetical protein | EDC56_0312 | Not Available | Positive | 345975 - 346118 | 5210.13 |
| 4,5-dopa dioxygenase extradiol | EDC56_0313 | Not Available | Positive | 346178 - 346957 | 29284.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
