Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphomannomutase | EDC56_3834 | Not Available | Positive | 4286703 - 4288055 | 49351.7 |
| two-component system ntrc family response regulator | EDC56_3835 | Not Available | Negative | 4288111 - 4289502 | 51611.8 |
| putative pep-cterm system histidine kinase | EDC56_3836 | Not Available | Negative | 4289518 - 4291575 | 76621.8 |
| octaprenyl-diphosphate synthase | EDC56_3837 | Not Available | Negative | 4291873 - 4292835 | 34931.9 |
| lsu ribosomal protein l21p | EDC56_3838 | Not Available | Positive | 4293097 - 4293408 | 11553.3 |
| lsu ribosomal protein l27p | EDC56_3839 | Not Available | Positive | 4293420 - 4293677 | 9062.08 |
| gtp-binding protein | EDC56_3840 | Not Available | Positive | 4293775 - 4294992 | 44532.7 |
| glutamate 5-kinase | EDC56_3841 | Not Available | Positive | 4295027 - 4296130 | 38787.6 |
| small subunit ribosomal protein s20 | EDC56_3842 | Not Available | Negative | 4296191 - 4296457 | 9589.69 |
| tetr family transcriptional regulator | EDC56_3843 | Not Available | Positive | 4296815 - 4297432 | 22467.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
