Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large subunit ribosomal protein l17 | EDC56_3824 | Not Available | Positive | 4274786 - 4275169 | 14503.6 |
| excinuclease abc subunit a | EDC56_3825 | Not Available | Negative | 4275242 - 4278046 | 103446.0 |
| putative mfs family arabinose efflux permease | EDC56_3826 | Not Available | Positive | 4278209 - 4279588 | 49010.7 |
| single-strand binding protein | EDC56_3827 | Not Available | Positive | 4279661 - 4280296 | 23097.5 |
| dtdp-4-dehydrorhamnose reductase | EDC56_3828 | Not Available | Positive | 4280393 - 4281256 | 31831.2 |
| molybdenum cofactor biosynthesis protein b | EDC56_3829 | Not Available | Positive | 4281260 - 4281790 | 18952.4 |
| molybdopterin molybdochelatase | EDC56_3830 | Not Available | Positive | 4281787 - 4282998 | 42026.1 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-1 | EDC56_3831 | Not Available | Negative | 4283058 - 4284275 | 42949.6 |
| 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase | EDC56_3832 | Not Available | Negative | 4284339 - 4284872 | 19333.5 |
| mannose-1-phosphate guanylyltransferase/mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | EDC56_3833 | Not Available | Positive | 4285184 - 4286596 | 52495.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
