Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large subunit ribosomal protein l18 | EDC56_3813 | Not Available | Positive | 4269026 - 4269376 | 12583.1 |
| small subunit ribosomal protein s5 | EDC56_3814 | Not Available | Positive | 4269386 - 4269895 | 17911.8 |
| lsu ribosomal protein l30p | EDC56_3815 | Not Available | Positive | 4269905 - 4270090 | 6834.48 |
| large subunit ribosomal protein l15 | EDC56_3816 | Not Available | Positive | 4270093 - 4270536 | 15189.7 |
| protein translocase subunit secy/sec61 alpha | EDC56_3817 | Not Available | Positive | 4270537 - 4271877 | 48139.9 |
| lsu ribosomal protein l36p | EDC56_3818 | Not Available | Positive | 4271935 - 4272051 | 4436.7 |
| small subunit ribosomal protein s13 | EDC56_3820 | Not Available | Positive | 4272201 - 4272557 | 13224.2 |
| ssu ribosomal protein s11p | EDC56_3821 | Not Available | Positive | 4272626 - 4273018 | 13851.6 |
| ssu ribosomal protein s4p | EDC56_3822 | Not Available | Positive | 4273039 - 4273659 | 23158.1 |
| dna-directed rna polymerase subunit alpha | EDC56_3823 | Not Available | Positive | 4273693 - 4274697 | 36354.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
