Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDC56_3753 | Not Available | Positive | 4214308 - 4214934 | 23067.6 |
| hypothetical protein | EDC56_3754 | Not Available | Positive | 4215170 - 4215364 | 7325.11 |
| putative membrane protein | EDC56_3755 | Not Available | Positive | 4215440 - 4218253 | 102952.0 |
| hypothetical protein | EDC56_3756 | Not Available | Positive | 4218416 - 4218997 | 21282.1 |
| snoal-like protein | EDC56_3757 | Not Available | Positive | 4219032 - 4219484 | 17113.4 |
| pimeloyl-acp methyl ester carboxylesterase | EDC56_3758 | Not Available | Negative | 4219510 - 4220481 | 36336.2 |
| outer membrane protein with beta-barrel domain | EDC56_3759 | Not Available | Positive | 4220730 - 4221314 | 21645.3 |
| hypothetical protein | EDC56_3760 | Not Available | Positive | 4221573 - 4223801 | 82517.2 |
| flavin-dependent dehydrogenase | EDC56_3761 | Not Available | Positive | 4223798 - 4224793 | 37475.4 |
| nucleotidyltransferase-like protein | EDC56_3762 | Not Available | Positive | 4225045 - 4225863 | 30252.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
