Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine dehydratase | EDC56_3743 | Not Available | Negative | 4203263 - 4204234 | 34723.6 |
| serine-glyoxylate aminotransferase | EDC56_3744 | Not Available | Negative | 4204260 - 4205435 | 42162.1 |
| iclr family transcriptional regulator | EDC56_3745 | Not Available | Positive | 4205657 - 4206484 | 29578.3 |
| uncharacterized protein glcg (duf336 family) | EDC56_3746 | Not Available | Positive | 4206642 - 4207061 | 14684.0 |
| ytoq family protein | EDC56_3747 | Not Available | Positive | 4207272 - 4207709 | 16313.1 |
| lema protein | EDC56_3748 | Not Available | Positive | 4208099 - 4208680 | 21881.9 |
| uncharacterized protein | EDC56_3749 | Not Available | Positive | 4208680 - 4209444 | 26171.1 |
| putative membrane protein | EDC56_3750 | Not Available | Positive | 4209444 - 4210097 | 24371.7 |
| hypothetical protein | EDC56_3751 | Not Available | Negative | 4210145 - 4210984 | 30594.8 |
| gh18 family chitinase | EDC56_3752 | Not Available | Positive | 4211652 - 4213688 | 72634.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
