Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trimethylamine-n-oxide reductase (cytochrome c) | EDC56_0294 | Not Available | Negative | 323396 - 325885 | 92424.2 |
| trimethylamine-n-oxide reductase cytochrome c-type subunit torc | EDC56_0295 | Not Available | Negative | 325898 - 327076 | 44270.7 |
| nitrate reductase nape | EDC56_0296 | Not Available | Negative | 327122 - 327289 | 6082.58 |
| succinyl-coa synthetase (adp-forming) alpha subunit | EDC56_0297 | Not Available | Negative | 327658 - 328533 | 29972.2 |
| succinyl-coa synthetase beta subunit | EDC56_0298 | Not Available | Negative | 328540 - 329700 | 41116.5 |
| dihydrolipoamide dehydrogenase | EDC56_0299 | Not Available | Negative | 329861 - 331309 | 50892.4 |
| 2-oxoglutarate dehydrogenase e2 component | EDC56_0300 | Not Available | Negative | 331439 - 332641 | 42912.8 |
| 2-oxoglutarate dehydrogenase e1 component | EDC56_0301 | Not Available | Negative | 332760 - 335588 | 105710.0 |
| succinate dehydrogenase / fumarate reductase iron-sulfur subunit | EDC56_0302 | Not Available | Negative | 335879 - 336586 | 26222.7 |
| succinate dehydrogenase subunit a | EDC56_0303 | Not Available | Negative | 336602 - 338371 | 64081.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
