Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDC56_3733 | Not Available | Positive | 4187961 - 4189787 | 66777.4 |
| atpase subunit of abc transporter with duplicated atpase domains | EDC56_3734 | Not Available | Negative | 4189847 - 4191451 | 59389.7 |
| 4-carboxymuconolactone decarboxylase | EDC56_3735 | Not Available | Positive | 4191815 - 4192195 | 13890.5 |
| drug/metabolite transporter (dmt)-like permease | EDC56_3736 | Not Available | Positive | 4192489 - 4193385 | 32243.9 |
| 3-phytase | EDC56_3737 | Not Available | Negative | 4193535 - 4195598 | 74268.4 |
| tonb-dependent receptor | EDC56_3738 | Not Available | Negative | 4195665 - 4198385 | 100072.0 |
| diguanylate cyclase (ggdef)-like protein | EDC56_3739 | Not Available | Positive | 4198789 - 4199733 | 35408.8 |
| arac-type transcriptional regulator | EDC56_3740 | Not Available | Positive | 4199736 - 4200923 | 44512.4 |
| ornithine cyclodeaminase | EDC56_3741 | Not Available | Negative | 4201031 - 4202023 | 34568.9 |
| d-3-hydroxyaspartate aldolase | EDC56_3742 | Not Available | Negative | 4202037 - 4203191 | 41451.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
