Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3100 family protein | EDC56_3689 | Not Available | Positive | 4147067 - 4147876 | 28350.6 |
| hypothetical protein | EDC56_3690 | Not Available | Positive | 4147913 - 4148380 | 16595.8 |
| hippurate hydrolase | EDC56_3691 | Not Available | Positive | 4148454 - 4149629 | 42875.9 |
| uncharacterized protein ydga (duf945 family) | EDC56_3692 | Not Available | Positive | 4149791 - 4152715 | 107417.0 |
| trap transporter 4tm/12tm fusion protein | EDC56_3693 | Not Available | Negative | 4152788 - 4155394 | 94527.3 |
| hypothetical protein | EDC56_3694 | Not Available | Negative | 4155548 - 4156519 | 34799.6 |
| hypothetical protein | EDC56_3696 | Not Available | Negative | 4156928 - 4157155 | 8518.46 |
| hypothetical protein | EDC56_3698 | Not Available | Positive | 4158038 - 4158340 | 11076.2 |
| peptidoglycan/lps o-acetylase oafa/yrhl | EDC56_3699 | Not Available | Negative | 4158635 - 4160563 | 73303.6 |
| n-acetylglutamate synthase-like gnat family acetyltransferase | EDC56_3700 | Not Available | Positive | 4161527 - 4161982 | 17187.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
