Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein ycfj | EDC56_3646 | Not Available | Negative | 4112379 - 4112915 | 18436.8 |
| hypothetical protein | EDC56_3647 | Not Available | Negative | 4113503 - 4114753 | 44995.9 |
| had superfamily hydrolase (tigr01509 family)/had superfamily hydrolase (tigr01549 family) | EDC56_3648 | Not Available | Negative | 4114896 - 4115618 | 25927.7 |
| putative transcriptional regulator | EDC56_3649 | Not Available | Positive | 4115880 - 4116269 | 15175.2 |
| alpha-beta hydrolase superfamily lysophospholipase | EDC56_3650 | Not Available | Positive | 4116464 - 4117417 | 35677.5 |
| hypothetical protein | EDC56_3651 | Not Available | Negative | 4117949 - 4118878 | 31893.8 |
| uncharacterized protein duf4375 | EDC56_3652 | Not Available | Positive | 4119044 - 4119475 | 16037.0 |
| hxlr family transcriptional regulator | EDC56_3653 | Not Available | Negative | 4119542 - 4119937 | 14631.6 |
| glutathione s-transferase | EDC56_3654 | Not Available | Positive | 4120055 - 4120702 | 24170.1 |
| adenylate cyclase | EDC56_3655 | Not Available | Negative | 4120796 - 4121266 | 18410.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
