Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDC56_0284 | Not Available | Positive | 311942 - 312718 | 29264.0 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | EDC56_0285 | Not Available | Positive | 312961 - 314064 | 41255.4 |
| phosphoribosyl 1,2-cyclic phosphodiesterase | EDC56_0286 | Not Available | Negative | 314108 - 314875 | 27757.2 |
| beta-barrel assembly machine subunit bamc | EDC56_0287 | Not Available | Negative | 314875 - 315975 | 41054.3 |
| 4-hydroxy-tetrahydrodipicolinate synthase | EDC56_0288 | Not Available | Negative | 315975 - 316853 | 30786.3 |
| uncharacterized protein duf3806 | EDC56_0289 | Not Available | Positive | 317088 - 317615 | 20301.0 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | EDC56_0290 | Not Available | Negative | 317728 - 318492 | 26624.8 |
| hypothetical protein | EDC56_0291 | Not Available | Positive | 318890 - 320695 | 64072.2 |
| long-chain acyl-coa synthetase | EDC56_0292 | Not Available | Positive | 320922 - 322712 | 67168.9 |
| tora-specific chaperone | EDC56_0293 | Not Available | Negative | 322758 - 323399 | 23637.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
