Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sos response umud protein | EDC56_3626 | Not Available | Negative | 4092931 - 4093365 | 15831.1 |
| nad-dependent deacetylase | EDC56_3627 | Not Available | Positive | 4093638 - 4094348 | 25826.7 |
| glutaredoxin | EDC56_3628 | Not Available | Positive | 4094358 - 4094597 | 9017.24 |
| tetr family transcriptional regulator | EDC56_3629 | Not Available | Negative | 4094610 - 4095212 | 23691.8 |
| acrr family transcriptional regulator | EDC56_3630 | Not Available | Negative | 4095209 - 4095874 | 25024.6 |
| cation diffusion facilitator czcd-associated flavoprotein czco | EDC56_3631 | Not Available | Positive | 4096137 - 4097591 | 54369.1 |
| serine aminopeptidase s33 family | EDC56_3632 | Not Available | Positive | 4097640 - 4098545 | 32820.1 |
| ypeb-like protein with putative protease inhibitory function | EDC56_3633 | Not Available | Positive | 4098683 - 4098979 | 10776.7 |
| rimj/riml family protein n-acetyltransferase | EDC56_3634 | Not Available | Positive | 4099163 - 4099696 | 19102.1 |
| ribosomal-protein-serine acetyltransferase | EDC56_3635 | Not Available | Positive | 4099805 - 4100338 | 20253.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
