Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDC56_3616 | Not Available | Positive | 4082534 - 4082680 | 5217.33 |
| hypothetical protein | EDC56_3617 | Not Available | Positive | 4082867 - 4084273 | 51381.1 |
| uncharacterized protein duf4345 | EDC56_3618 | Not Available | Positive | 4084531 - 4084956 | 15017.9 |
| hypothetical protein | EDC56_3619 | Not Available | Positive | 4085143 - 4085736 | 22621.1 |
| ca-activated chloride channel family protein | EDC56_3620 | Not Available | Negative | 4085780 - 4087462 | 60514.7 |
| cic family chloride channel protein | EDC56_3621 | Not Available | Positive | 4087935 - 4089368 | 51133.6 |
| hypothetical protein | EDC56_3622 | Not Available | Positive | 4089572 - 4090435 | 33953.4 |
| hypothetical protein | EDC56_3623 | Not Available | Positive | 4090447 - 4090689 | 8852.45 |
| putative metal-dependent hydrolase | EDC56_3624 | Not Available | Positive | 4090861 - 4091658 | 31484.3 |
| dna polymerase v | EDC56_3625 | Not Available | Negative | 4091666 - 4092934 | 46748.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
