Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDC56_3596 | Not Available | Positive | 4062326 - 4062700 | 13979.0 |
| l-glutaminase | EDC56_3597 | Not Available | Negative | 4062719 - 4063645 | 34219.0 |
| atp-dependent hsluv protease atp-binding subunit hslu | EDC56_3598 | Not Available | Negative | 4063874 - 4065208 | 49482.1 |
| atp-dependent hsluv protease subunit hslv | EDC56_3599 | Not Available | Negative | 4065232 - 4065789 | 19943.8 |
| sporulation related protein | EDC56_3600 | Not Available | Negative | 4065996 - 4066646 | 24213.7 |
| arginyl-trna synthetase | EDC56_3601 | Not Available | Negative | 4066651 - 4068411 | 64339.0 |
| replication restart dna helicase pria | EDC56_3602 | Not Available | Negative | 4068450 - 4070723 | 83448.9 |
| lsu ribosomal protein l31p | EDC56_3603 | Not Available | Positive | 4071013 - 4071225 | 7856.42 |
| malate dehydrogenase (oxaloacetate-decarboxylating)(nadp+) | EDC56_3604 | Not Available | Positive | 4072080 - 4073339 | 44515.4 |
| duf971 family protein | EDC56_3605 | Not Available | Positive | 4073447 - 4073848 | 14840.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
