Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase family protein | EDC56_3576 | Not Available | Positive | 4035430 - 4036203 | 28800.0 |
| pimeloyl-acp methyl ester carboxylesterase | EDC56_3577 | Not Available | Positive | 4036568 - 4037338 | 28297.8 |
| trap-type mannitol/chloroaromatic compound transport system substrate-binding protein | EDC56_3578 | Not Available | Positive | 4037822 - 4038883 | 39537.7 |
| cyclopropane-fatty-acyl-phospholipid synthase | EDC56_3579 | Not Available | Negative | 4039055 - 4040185 | 42996.3 |
| tautomerase-like protein | EDC56_3580 | Not Available | Positive | 4041019 - 4041405 | 14548.7 |
| hypothetical protein | EDC56_3581 | Not Available | Positive | 4041980 - 4042720 | 27157.4 |
| putative damage-inducible protein dinb | EDC56_3582 | Not Available | Positive | 4043140 - 4043691 | 20239.0 |
| nad(p)h-dependent fmn reductase | EDC56_3583 | Not Available | Negative | 4043754 - 4044281 | 18885.4 |
| putative blue pigment (indigoidine) exporter | EDC56_3584 | Not Available | Negative | 4044393 - 4045277 | 31551.5 |
| dna-binding marr family transcriptional regulator | EDC56_3585 | Not Available | Positive | 4045396 - 4045878 | 17866.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
