Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | EDC56_3565 | Not Available | Negative | 4022719 - 4023324 | 22420.0 |
| lysr family transcriptional regulator | EDC56_3566 | Not Available | Positive | 4023487 - 4024365 | 33174.9 |
| putative cold-shock dna-binding protein | EDC56_3568 | Not Available | Positive | 4025093 - 4025302 | 7415.66 |
| hypothetical protein | EDC56_3569 | Not Available | Positive | 4026069 - 4027535 | 53368.6 |
| putative hydrolase of the had superfamily | EDC56_3570 | Not Available | Positive | 4027915 - 4028637 | 26336.2 |
| l-amino acid n-acyltransferase ynca | EDC56_3571 | Not Available | Positive | 4029074 - 4029580 | 18790.2 |
| tetr family transcriptional regulator | EDC56_3572 | Not Available | Negative | 4029890 - 4030624 | 27514.2 |
| putative acid phosphatase of had superfamily subfamily iiib | EDC56_3573 | Not Available | Positive | 4030969 - 4031931 | 35967.2 |
| putative atp-grasp superfamily atp-dependent carboligase | EDC56_3574 | Not Available | Positive | 4032651 - 4033766 | 42367.4 |
| putative mfs family arabinose efflux permease | EDC56_3575 | Not Available | Positive | 4033771 - 4035015 | 44956.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
