Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylate cyclase | EDC56_0274 | Not Available | Negative | 299179 - 300579 | 50595.4 |
| polysaccharide deacetylase | EDC56_0275 | Not Available | Positive | 300773 - 301897 | 42498.4 |
| bax protein | EDC56_0276 | Not Available | Negative | 301990 - 302829 | 30626.7 |
| tetr family transcriptional regulator | EDC56_0277 | Not Available | Positive | 303093 - 303728 | 23334.0 |
| hypothetical protein | EDC56_0278 | Not Available | Negative | 303741 - 304463 | 28170.4 |
| atp-dependent dna helicase recq | EDC56_0279 | Not Available | Negative | 304465 - 306597 | 79167.9 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | EDC56_0280 | Not Available | Positive | 306704 - 307987 | 47028.0 |
| agza family xanthine/uracil permease-like mfs transporter | EDC56_0281 | Not Available | Negative | 308074 - 309372 | 44898.1 |
| putative f420-dependent oxidoreductase | EDC56_0282 | Not Available | Negative | 309788 - 310801 | 37524.9 |
| esterase | EDC56_0283 | Not Available | Negative | 311028 - 311789 | 28194.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
