Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 3 | EDC56_3524 | Not Available | Negative | 3987383 - 3988960 | 58885.2 |
| alkyl sulfatase bds1-like metallo-beta-lactamase superfamily hydrolase | EDC56_3525 | Not Available | Negative | 3989106 - 3991139 | 74456.3 |
| dna-binding transcriptional lysr family regulator | EDC56_3526 | Not Available | Positive | 3991259 - 3992152 | 33591.2 |
| argininosuccinate synthase | EDC56_3527 | Not Available | Negative | 3992269 - 3993489 | 45534.1 |
| dihydroorotase | EDC56_3528 | Not Available | Positive | 3993778 - 3994812 | 38228.6 |
| rnase t | EDC56_3529 | Not Available | Positive | 3994831 - 3995499 | 24809.6 |
| hypothetical protein | EDC56_3530 | Not Available | Positive | 3995755 - 3996279 | 19718.0 |
| hypothetical protein | EDC56_3531 | Not Available | Positive | 3996383 - 3996724 | 12899.2 |
| hypothetical protein | EDC56_3532 | Not Available | Positive | 3997409 - 3997789 | 13826.7 |
| hypothetical protein | EDC56_3533 | Not Available | Positive | 3997805 - 3998167 | 13820.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
