Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| topoisomerase-4 subunit a | EDC56_3514 | Not Available | Negative | 3972289 - 3974544 | 83331.8 |
| sulp family sulfate permease | EDC56_3515 | Not Available | Positive | 3974856 - 3976349 | 53142.0 |
| universal stress protein family protein | EDC56_3516 | Not Available | Positive | 3976349 - 3977200 | 30640.9 |
| hypothetical protein | EDC56_3517 | Not Available | Negative | 3977231 - 3978025 | 28604.9 |
| hypothetical protein | EDC56_3518 | Not Available | Positive | 3978365 - 3978649 | 10357.2 |
| arac-like dna-binding protein | EDC56_3519 | Not Available | Negative | 3978727 - 3979995 | 46228.5 |
| acyl-homoserine-lactone acylase | EDC56_3520 | Not Available | Positive | 3980234 - 3982702 | 89139.7 |
| phospho-acceptor domain-containing protein | EDC56_3521 | Not Available | Negative | 3982813 - 3984897 | 76762.4 |
| glutathione peroxidase | EDC56_3522 | Not Available | Positive | 3985208 - 3985705 | 18084.5 |
| putative cardiolipin synthase | EDC56_3523 | Not Available | Negative | 3985706 - 3987250 | 57668.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
