Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome biogenesis gtpase | EDC56_3504 | Not Available | Positive | 3959775 - 3960797 | 37736.1 |
| thiosulfate/3-mercaptopyruvate sulfurtransferase | EDC56_3505 | Not Available | Positive | 3960814 - 3961656 | 30946.7 |
| phosphatidylserine decarboxylase | EDC56_3506 | Not Available | Positive | 3961681 - 3962529 | 31537.9 |
| lysyl-trna synthetase class 2 | EDC56_3507 | Not Available | Negative | 3962578 - 3963579 | 37075.9 |
| elongation factor p | EDC56_3508 | Not Available | Negative | 3963634 - 3964203 | 20693.4 |
| l-lysine 2,3-aminomutase | EDC56_3509 | Not Available | Positive | 3964397 - 3965455 | 40430.7 |
| hypothetical protein | EDC56_3510 | Not Available | Positive | 3965662 - 3967485 | 68442.1 |
| pas domain s-box-containing protein | EDC56_3511 | Not Available | Positive | 3967592 - 3969604 | 74671.4 |
| phosphoserine phosphatase | EDC56_3512 | Not Available | Negative | 3969661 - 3970884 | 44543.6 |
| hypothetical protein | EDC56_3513 | Not Available | Positive | 3971041 - 3972228 | 43963.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
