Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protease ftsh subunit hflc | EDC56_3493 | Not Available | Negative | 3947327 - 3948202 | 32738.1 |
| protease ftsh subunit hflk | EDC56_3494 | Not Available | Negative | 3948203 - 3949351 | 42311.2 |
| gtp-binding protein hflx | EDC56_3495 | Not Available | Negative | 3949521 - 3950849 | 49561.6 |
| rna-binding protein hfq | EDC56_3496 | Not Available | Negative | 3950867 - 3951115 | 9276.38 |
| trna dimethylallyltransferase | EDC56_3497 | Not Available | Negative | 3951348 - 3952376 | 38612.4 |
| dna mismatch repair protein mutl | EDC56_3498 | Not Available | Negative | 3952395 - 3954248 | 67644.7 |
| n-acetylmuramoyl-l-alanine amidase | EDC56_3499 | Not Available | Negative | 3954304 - 3955635 | 47906.0 |
| trna threonylcarbamoyladenosine biosynthesis protein tsae | EDC56_3500 | Not Available | Negative | 3955753 - 3956229 | 17524.2 |
| nad(p)h-hydrate epimerase | EDC56_3501 | Not Available | Negative | 3956261 - 3957802 | 53246.9 |
| oligoribonuclease | EDC56_3503 | Not Available | Negative | 3958998 - 3959546 | 20329.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
