Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii delta subunit | EDC56_3473 | Not Available | Positive | 3932263 - 3933276 | 37604.5 |
| hypothetical protein | EDC56_3474 | Not Available | Positive | 3933380 - 3933910 | 19685.5 |
| hypoxanthine phosphoribosyltransferase | EDC56_3475 | Not Available | Negative | 3933981 - 3934538 | 20503.7 |
| urease accessory protein | EDC56_3476 | Not Available | Negative | 3934681 - 3935295 | 21953.5 |
| urease accessory protein | EDC56_3477 | Not Available | Negative | 3935319 - 3936023 | 25254.6 |
| urease accessory protein | EDC56_3478 | Not Available | Negative | 3935986 - 3936438 | 17135.4 |
| urease | EDC56_3479 | Not Available | Negative | 3936479 - 3938182 | 61047.7 |
| urease subunit beta | EDC56_3480 | Not Available | Negative | 3938179 - 3938505 | 11988.5 |
| urease subunit gamma | EDC56_3481 | Not Available | Negative | 3938514 - 3938816 | 10904.3 |
| urease accessory protein | EDC56_3482 | Not Available | Negative | 3938831 - 3939694 | 32157.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
