Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate ammonia-lyase | EDC56_3453 | Not Available | Negative | 3910320 - 3911753 | 51862.4 |
| outer membrane receptor protein involved in fe transport | EDC56_3454 | Not Available | Negative | 3912376 - 3914784 | 87233.0 |
| endonuclease iv | EDC56_3455 | Not Available | Negative | 3915156 - 3916019 | 32019.0 |
| hemoglobin | EDC56_3456 | Not Available | Negative | 3916092 - 3916526 | 16545.5 |
| tolb protein | EDC56_3457 | Not Available | Negative | 3916537 - 3917829 | 47257.4 |
| colicin import membrane protein | EDC56_3458 | Not Available | Negative | 3917826 - 3918611 | 29836.6 |
| biopolymer transport protein tolr | EDC56_3459 | Not Available | Negative | 3918618 - 3919031 | 14960.6 |
| cell division and transport-associated protein tolq | EDC56_3460 | Not Available | Negative | 3919072 - 3919776 | 26091.4 |
| 4-hydroxybenzoyl-coa thioesterase/acyl-coa thioester hydrolase | EDC56_3461 | Not Available | Negative | 3920002 - 3920403 | 15057.4 |
| holliday junction dna helicase subunit ruvb | EDC56_3462 | Not Available | Negative | 3920449 - 3921468 | 37533.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
