Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine transport system substrate-binding protein | EDC56_3443 | Not Available | Negative | 3899866 - 3900609 | 27305.6 |
| arginine transport system atp-binding protein | EDC56_3444 | Not Available | Negative | 3900621 - 3901358 | 26762.8 |
| elongation factor p | EDC56_3445 | Not Available | Negative | 3901932 - 3902507 | 20977.0 |
| putative mate family efflux protein | EDC56_3446 | Not Available | Negative | 3902570 - 3903916 | 47852.9 |
| spermidine synthase | EDC56_3447 | Not Available | Negative | 3903919 - 3904674 | 28362.3 |
| acetate kinase | EDC56_3448 | Not Available | Positive | 3904939 - 3906114 | 41456.6 |
| phosphate acetyltransferase | EDC56_3449 | Not Available | Positive | 3906206 - 3908323 | 75481.8 |
| glucose-6-phosphate 1-epimerase | EDC56_3450 | Not Available | Positive | 3908512 - 3909456 | 35955.8 |
| ribosome-associated protein | EDC56_3451 | Not Available | Positive | 3909450 - 3909863 | 15811.4 |
| hopj type iii effector protein | EDC56_3452 | Not Available | Positive | 3909919 - 3910266 | 12834.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
