Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| condensin subunit scpa | EDC56_0264 | Not Available | Negative | 290879 - 291811 | 35382.3 |
| trna threonylcarbamoyl adenosine modification protein (sua5/ycio/yrdc/ywlc family) | EDC56_0265 | Not Available | Negative | 291882 - 292508 | 23036.9 |
| hypothetical protein | EDC56_0266 | Not Available | Negative | 292647 - 293501 | 30780.6 |
| intracellular septation protein | EDC56_0267 | Not Available | Positive | 293669 - 294256 | 22185.5 |
| hypothetical protein | EDC56_0268 | Not Available | Positive | 294258 - 294557 | 10848.8 |
| sh3 domain protein | EDC56_0269 | Not Available | Positive | 294808 - 295533 | 26737.4 |
| peptidyl-prolyl cis-trans isomerase a (cyclophilin a)/peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | EDC56_0270 | Not Available | Positive | 295679 - 296395 | 25723.7 |
| pyridoxine 5-phosphate synthase | EDC56_0271 | Not Available | Positive | 296467 - 297231 | 27881.3 |
| glyoxylase-like metal-dependent hydrolase (beta-lactamase superfamily ii) | EDC56_0272 | Not Available | Positive | 297308 - 298138 | 31290.6 |
| hypothetical protein | EDC56_0273 | Not Available | Negative | 298154 - 299182 | 38814.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
