Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recq-like atp-dependent dna helicase | EDC56_3423 | Not Available | Positive | 3873898 - 3875859 | 73770.5 |
| peptidoglycan/lps o-acetylase oafa/yrhl | EDC56_3424 | Not Available | Positive | 3876145 - 3878142 | 74987.5 |
| hypothetical protein | EDC56_3425 | Not Available | Positive | 3879034 - 3879192 | 5799.5 |
| hypothetical protein | EDC56_3426 | Not Available | Positive | 3879561 - 3880013 | 15595.1 |
| iron complex outermembrane receptor protein | EDC56_3427 | Not Available | Positive | 3880404 - 3882434 | 74916.9 |
| putative membrane protein yccc | EDC56_3428 | Not Available | Positive | 3882575 - 3884662 | 78504.0 |
| rdd family protein | EDC56_3429 | Not Available | Negative | 3884667 - 3885638 | 36085.6 |
| hypothetical protein | EDC56_3430 | Not Available | Positive | 3886096 - 3886350 | 9053.03 |
| hypothetical protein | EDC56_3431 | Not Available | Negative | 3886308 - 3887060 | 28720.1 |
| serine protease | EDC56_3432 | Not Available | Negative | 3887060 - 3889786 | 95688.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
