Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone grpe | EDC56_3390 | Not Available | Negative | 3839261 - 3839884 | 22922.9 |
| dna replication and repair protein recn | EDC56_3391 | Not Available | Positive | 3840153 - 3841814 | 60703.7 |
| fur family ferric uptake transcriptional regulator | EDC56_3392 | Not Available | Negative | 3841927 - 3842346 | 16005.1 |
| outer membrane protein assembly factor bame (lipoprotein component of bamabcde complex) | EDC56_3393 | Not Available | Positive | 3842404 - 3842910 | 18578.8 |
| hypothetical protein | EDC56_3394 | Not Available | Negative | 3842946 - 3843230 | 10323.4 |
| ribosome-associated toxin rata of ratab toxin-antitoxin module | EDC56_3395 | Not Available | Negative | 3843235 - 3843669 | 15647.8 |
| ssra-binding protein | EDC56_3396 | Not Available | Positive | 3843868 - 3844347 | 18114.3 |
| Tmrna,resume consensus sequence (at 88): attagttgccaacgacga | Not Available | Not Available | Positive | 3844533 - 3844887 | Not Available |
| hypothetical protein | EDC56_3398 | Not Available | Positive | 3845292 - 3845750 | 16186.8 |
| uncharacterized protein duf2806 | EDC56_3399 | Not Available | Positive | 3845853 - 3846866 | 37952.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
