Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydropteroate synthase | EDC56_3380 | Not Available | Negative | 3825361 - 3826251 | 31285.9 |
| cell division protease ftsh | EDC56_3381 | Not Available | Negative | 3826276 - 3828297 | 73327.2 |
| 23s rrna um-2552 2'-o-methyltransferase | EDC56_3382 | Not Available | Negative | 3828382 - 3828999 | 22576.2 |
| rna-binding protein | EDC56_3383 | Not Available | Positive | 3829278 - 3829583 | 11298.0 |
| transcription elongation factor grea | EDC56_3384 | Not Available | Negative | 3829674 - 3830150 | 17359.5 |
| carbamoyl-phosphate synthase large subunit | EDC56_3385 | Not Available | Negative | 3830154 - 3833369 | 117892.0 |
| carbamoyl-phosphate synthase small subunit | EDC56_3386 | Not Available | Negative | 3833452 - 3834579 | 40732.4 |
| dihydrodipicolinate reductase | EDC56_3387 | Not Available | Negative | 3834893 - 3835699 | 27907.1 |
| molecular chaperone dnaj | EDC56_3388 | Not Available | Negative | 3835913 - 3837037 | 40047.4 |
| molecular chaperone dnak | EDC56_3389 | Not Available | Negative | 3837170 - 3839104 | 68587.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
