Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine55 synthase | EDC56_3370 | Not Available | Negative | 3815805 - 3816743 | 34087.8 |
| ribosome-binding factor a | EDC56_3371 | Not Available | Negative | 3816755 - 3817168 | 15198.8 |
| translation initiation factor if-2 | EDC56_3372 | Not Available | Negative | 3817298 - 3820129 | 101707.0 |
| nusa antitermination factor | EDC56_3373 | Not Available | Negative | 3820151 - 3821644 | 54702.8 |
| ribosome maturation factor rimp | EDC56_3374 | Not Available | Negative | 3821755 - 3822216 | 17165.6 |
| Trna-met | Not Available | Not Available | Positive | 3822470 - 3822546 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 3822690 - 3822776 | Not Available |
| preprotein translocase subunit secg | EDC56_3377 | Not Available | Negative | 3822797 - 3823156 | 12161.5 |
| triosephosphate isomerase | EDC56_3378 | Not Available | Negative | 3823159 - 3823914 | 26262.4 |
| phosphoglucosamine mutase | EDC56_3379 | Not Available | Negative | 3824008 - 3825354 | 47275.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
