Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDC56_3360 | Not Available | Positive | 3801938 - 3802120 | 7241.21 |
| two-component sensor kinase cbra | EDC56_3361 | Not Available | Positive | 3802117 - 3805071 | 108745.0 |
| dna-binding ntrc family response regulator | EDC56_3362 | Not Available | Positive | 3805152 - 3806537 | 51694.6 |
| poly(a) polymerase | EDC56_3363 | Not Available | Positive | 3807026 - 3808369 | 51142.8 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | EDC56_3364 | Not Available | Positive | 3808396 - 3808887 | 18272.7 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | EDC56_3365 | Not Available | Positive | 3809050 - 3809862 | 28266.0 |
| pantoate--beta-alanine ligase | EDC56_3366 | Not Available | Positive | 3810130 - 3811008 | 32021.5 |
| acetyl-coenzyme a synthetase | EDC56_3367 | Not Available | Positive | 3811189 - 3813129 | 71253.3 |
| polyribonucleotide nucleotidyltransferase | EDC56_3368 | Not Available | Negative | 3813229 - 3815322 | 74640.0 |
| small subunit ribosomal protein s15 | EDC56_3369 | Not Available | Negative | 3815411 - 3815680 | 9980.99 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
