Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylglutamate kinase | EDC56_3340 | Not Available | Negative | 3781178 - 3782077 | 31602.6 |
| phosphomannomutase | EDC56_3341 | Not Available | Negative | 3782115 - 3784538 | 87674.5 |
| phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase | EDC56_3342 | Not Available | Negative | 3784610 - 3785806 | 42038.5 |
| dna repair protein radc | EDC56_3343 | Not Available | Positive | 3785909 - 3786583 | 24344.8 |
| lsu ribosomal protein l28p | EDC56_3344 | Not Available | Positive | 3786777 - 3787013 | 8990.08 |
| lsu ribosomal protein l33p | EDC56_3345 | Not Available | Positive | 3787025 - 3787195 | 6440.87 |
| sulfoxide reductase heme-binding subunit yedz | EDC56_3346 | Not Available | Negative | 3787522 - 3788118 | 22880.9 |
| sulfoxide reductase catalytic subunit yedy | EDC56_3347 | Not Available | Negative | 3788136 - 3789107 | 36519.5 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | EDC56_3348 | Not Available | Negative | 3789226 - 3790056 | 29947.7 |
| lysr family positive regulator for ilvc | EDC56_3349 | Not Available | Negative | 3790128 - 3791039 | 33599.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
