Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| reactive intermediate/imine deaminase | EDC56_3330 | Not Available | Negative | 3772469 - 3772852 | 13506.2 |
| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | EDC56_3331 | Not Available | Negative | 3772928 - 3775042 | 79048.5 |
| dna-directed rna polymerase subunit omega | EDC56_3332 | Not Available | Negative | 3775184 - 3775444 | 9648.32 |
| guanylate kinase | EDC56_3333 | Not Available | Negative | 3775587 - 3776210 | 23392.0 |
| uncharacterized protein (tigr00255 family) | EDC56_3334 | Not Available | Negative | 3776216 - 3777097 | 33600.3 |
| rnase ph | EDC56_3335 | Not Available | Positive | 3777306 - 3778025 | 25627.8 |
| exodeoxyribonuclease-3 | EDC56_3336 | Not Available | Negative | 3778077 - 3778850 | 29400.2 |
| orotate phosphoribosyltransferase | EDC56_3337 | Not Available | Positive | 3779128 - 3779769 | 22884.3 |
| hypothetical protein | EDC56_3338 | Not Available | Positive | 3779824 - 3780444 | 23566.1 |
| tetr family transcriptional regulator | EDC56_3339 | Not Available | Negative | 3780467 - 3781078 | 22988.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
