Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase-3 subunit epsilon | EDC56_0254 | Not Available | Negative | 281480 - 282112 | 23256.2 |
| drug/metabolite transporter (dmt)-like permease | EDC56_0255 | Not Available | Positive | 282315 - 283301 | 35689.4 |
| diguanylate cyclase (ggdef)-like protein | EDC56_0256 | Not Available | Positive | 283495 - 284616 | 41958.1 |
| trna 2-thiocytidine biosynthesis protein ttca | EDC56_0257 | Not Available | Negative | 284625 - 285578 | 35333.3 |
| malate dehydrogenase | EDC56_0258 | Not Available | Positive | 285920 - 286957 | 37661.7 |
| hypothetical protein | EDC56_0259 | Not Available | Positive | 287149 - 287550 | 15024.8 |
| cupin 2 domain-containing protein | EDC56_0260 | Not Available | Negative | 287504 - 287893 | 14352.0 |
| enoyl-coa hydratase | EDC56_0261 | Not Available | Negative | 287883 - 288689 | 29489.6 |
| 23s rrna pseudouridine2605 synthase | EDC56_0262 | Not Available | Negative | 288858 - 289679 | 31342.6 |
| segregation and condensation protein b | EDC56_0263 | Not Available | Negative | 289680 - 290882 | 45133.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
