Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anti-sigma b factor antagonist | EDC56_3320 | Not Available | Positive | 3762946 - 3763278 | 12181.8 |
| mannose-1-phosphate guanylyltransferase | EDC56_3321 | Not Available | Positive | 3763290 - 3764486 | 43570.2 |
| anti-sigma regulatory factor (ser/thr protein kinase) | EDC56_3322 | Not Available | Positive | 3764486 - 3764944 | 17512.0 |
| chalcone isomerase-like protein | EDC56_3323 | Not Available | Negative | 3764995 - 3765534 | 19455.3 |
| 4-hydroxybenzoate polyprenyltransferase | EDC56_3324 | Not Available | Negative | 3765607 - 3766503 | 33678.1 |
| chorismate lyase | EDC56_3325 | Not Available | Negative | 3766582 - 3767181 | 23500.1 |
| rubredoxin-nad+ reductase | EDC56_3326 | Not Available | Positive | 3767437 - 3768792 | 47571.7 |
| nucleoid protein hu alpha subunit | EDC56_3327 | Not Available | Positive | 3769004 - 3769276 | 9665.6 |
| atp-dependent dna helicase recg | EDC56_3328 | Not Available | Negative | 3769341 - 3771419 | 76672.1 |
| nucleoside-diphosphate-sugar epimerase | EDC56_3329 | Not Available | Positive | 3771562 - 3772422 | 31348.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
