Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioesterase ycia | EDC56_3310 | Not Available | Negative | 3751177 - 3751587 | 14710.9 |
| tripartite atp-independent transporter dctm subunit | EDC56_3311 | Not Available | Negative | 3751621 - 3752988 | 48252.9 |
| trap-type mannitol/chloroaromatic compound transport system permease small subunit | EDC56_3312 | Not Available | Negative | 3752981 - 3753520 | 19738.2 |
| uncharacterized protein duf4265 | EDC56_3313 | Not Available | Positive | 3753865 - 3754326 | 17347.9 |
| hypothetical protein | EDC56_3314 | Not Available | Positive | 3754407 - 3755174 | 29133.9 |
| uncharacterized protein duf938 | EDC56_3315 | Not Available | Positive | 3755113 - 3755766 | 23839.9 |
| enoyl-coa hydratase/carnithine racemase | EDC56_3316 | Not Available | Positive | 3755900 - 3757030 | 40690.7 |
| nad(p) transhydrogenase | EDC56_3317 | Not Available | Positive | 3757133 - 3758524 | 51112.6 |
| signal transduction histidine kinase | EDC56_3318 | Not Available | Positive | 3758757 - 3761507 | 102511.0 |
| sigma-b regulation protein rsbu (phosphoserine phosphatase) | EDC56_3319 | Not Available | Positive | 3761659 - 3762927 | 47267.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
