Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | EDC56_3300 | Not Available | Positive | 3739309 - 3740187 | 31691.7 |
| tetr family transcriptional regulator | EDC56_3301 | Not Available | Positive | 3740272 - 3740901 | 24160.9 |
| nitroreductase | EDC56_3302 | Not Available | Positive | 3740943 - 3741623 | 25358.4 |
| putative mate family efflux protein | EDC56_3303 | Not Available | Negative | 3741565 - 3742944 | 49923.9 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | EDC56_3304 | Not Available | Negative | 3742986 - 3744098 | 38938.5 |
| chey-like chemotaxis protein | EDC56_3305 | Not Available | Positive | 3744237 - 3745034 | 29419.7 |
| rpir family transcriptional regulator | EDC56_3306 | Not Available | Negative | 3745038 - 3745928 | 32488.9 |
| recombinase | EDC56_3307 | Not Available | Negative | 3746195 - 3747634 | 53753.4 |
| dna helicase-2/atp-dependent dna helicase pcra | EDC56_3308 | Not Available | Positive | 3747808 - 3749967 | 81662.7 |
| trap-type mannitol/chloroaromatic compound transport system substrate-binding protein | EDC56_3309 | Not Available | Positive | 3750053 - 3751180 | 41381.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
