Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDC56_3270 | Not Available | Positive | 3705206 - 3705481 | 10190.4 |
| yidc/oxa1 family membrane protein insertase | EDC56_3271 | Not Available | Positive | 3705478 - 3707154 | 63378.5 |
| trna modification gtpase trme | EDC56_3272 | Not Available | Positive | 3707267 - 3708643 | 49535.8 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme | EDC56_3273 | Not Available | Positive | 3709295 - 3711199 | 70440.9 |
| 16s rrna (guanine527-n7)-methyltransferase | EDC56_3274 | Not Available | Positive | 3711174 - 3711821 | 24220.6 |
| chromosome partitioning protein | EDC56_3275 | Not Available | Positive | 3711867 - 3712661 | 28766.8 |
| parb family chromosome partitioning protein | EDC56_3276 | Not Available | Positive | 3712715 - 3713608 | 32025.7 |
| atp synthase protein i | EDC56_3277 | Not Available | Positive | 3713836 - 3714243 | 14798.6 |
| f-type h+-transporting atpase subunit a | EDC56_3278 | Not Available | Positive | 3714262 - 3715185 | 34053.1 |
| f-type h+-transporting atpase subunit c | EDC56_3279 | Not Available | Positive | 3715234 - 3715473 | 7868.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
