Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-glycero-d-manno-heptose 1,7-bisphosphate phosphatase | EDC56_3260 | Not Available | Positive | 3694770 - 3695375 | 21837.2 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | EDC56_3261 | Not Available | Positive | 3695347 - 3696087 | 27169.5 |
| lrp/asnc family transcriptional regulator | EDC56_3262 | Not Available | Negative | 3696110 - 3696571 | 17681.6 |
| threonine/homoserine/homoserine lactone efflux protein | EDC56_3263 | Not Available | Positive | 3696715 - 3697332 | 21837.3 |
| dna gyrase subunit b | EDC56_3264 | Not Available | Negative | 3697825 - 3700242 | 89174.9 |
| dna replication and repair protein recf | EDC56_3265 | Not Available | Negative | 3700235 - 3701353 | 41973.4 |
| dna polymerase-3 subunit beta | EDC56_3266 | Not Available | Negative | 3701395 - 3702510 | 41075.5 |
| chromosomal replication initiator protein dnaa | EDC56_3267 | Not Available | Negative | 3702558 - 3704174 | 60150.4 |
| lsu ribosomal protein l34p | EDC56_3268 | Not Available | Positive | 3704653 - 3704787 | 5213.62 |
| ribonuclease p protein component | EDC56_3269 | Not Available | Positive | 3704808 - 3705188 | 14702.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
