Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein duf2608 | EDC56_3250 | Not Available | Positive | 3684832 - 3685797 | 35891.8 |
| phospholipase c | EDC56_3251 | Not Available | Positive | 3685851 - 3687251 | 51362.6 |
| hypothetical protein | EDC56_3252 | Not Available | Negative | 3687368 - 3687982 | 23346.6 |
| hypothetical protein | EDC56_3253 | Not Available | Negative | 3688073 - 3688384 | 12000.4 |
| hypothetical protein | EDC56_3254 | Not Available | Negative | 3688555 - 3689217 | 24617.5 |
| hypothetical protein | EDC56_3255 | Not Available | Positive | 3689821 - 3689919 | 3616.34 |
| methyltransferase family protein | EDC56_3256 | Not Available | Positive | 3689925 - 3690494 | 20919.7 |
| kdo2-lipid iv(a) lauroyltransferase | EDC56_3257 | Not Available | Negative | 3690479 - 3691390 | 33899.9 |
| glycyl-trna synthetase alpha chain | EDC56_3258 | Not Available | Positive | 3691721 - 3692668 | 35830.4 |
| glycyl-trna synthetase beta chain | EDC56_3259 | Not Available | Positive | 3692668 - 3694761 | 76083.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
