Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDC56_3240 | Not Available | Positive | 3671270 - 3671797 | 20266.9 |
| hypothetical protein | EDC56_3241 | Not Available | Positive | 3672050 - 3672826 | 29729.3 |
| hypothetical protein | EDC56_3242 | Not Available | Positive | 3673077 - 3673271 | 6948.49 |
| hypothetical protein | EDC56_3243 | Not Available | Positive | 3673699 - 3674046 | 12685.0 |
| uncharacterized protein duf2860 | EDC56_3244 | Not Available | Negative | 3674293 - 3675276 | 35356.9 |
| peptidase m48-like protein | EDC56_3245 | Not Available | Positive | 3675743 - 3677065 | 49303.4 |
| hypothetical protein | EDC56_3246 | Not Available | Positive | 3677067 - 3678488 | 51655.5 |
| hypothetical protein | EDC56_3247 | Not Available | Negative | 3678670 - 3679101 | 15813.3 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | EDC56_3248 | Not Available | Negative | 3679162 - 3680016 | 31515.6 |
| dyp-type peroxidase family | EDC56_3249 | Not Available | Positive | 3681150 - 3684773 | 135099.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
