Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysm domain-containing protein | EDC56_3230 | Not Available | Negative | 3656001 - 3657026 | 37310.8 |
| peptide deformylase | EDC56_3231 | Not Available | Positive | 3657255 - 3657758 | 18792.6 |
| methionyl-trna formyltransferase | EDC56_3232 | Not Available | Positive | 3657791 - 3658765 | 35036.1 |
| 16s rrna m(5)c-967 methyltransferase | EDC56_3233 | Not Available | Positive | 3658758 - 3660062 | 48198.0 |
| trk system potassium uptake protein trka | EDC56_3234 | Not Available | Positive | 3660151 - 3661524 | 50098.6 |
| trk system potassium uptake protein trkh | EDC56_3235 | Not Available | Positive | 3661538 - 3662989 | 52950.8 |
| hypothetical protein | EDC56_3236 | Not Available | Positive | 3663214 - 3663597 | 14731.3 |
| hypothetical protein | EDC56_3237 | Not Available | Positive | 3663806 - 3664657 | 31847.0 |
| hypothetical protein | EDC56_3238 | Not Available | Positive | 3665019 - 3667337 | 84130.6 |
| hemagglutinin-like protein | EDC56_3239 | Not Available | Positive | 3667342 - 3671268 | 140350.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
