Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| selenophosphate synthase | EDC56_3200 | Not Available | Negative | 3626760 - 3627800 | 36195.6 |
| phosphonate transport system substrate-binding protein | EDC56_3201 | Not Available | Positive | 3627913 - 3628842 | 34444.1 |
| phosphonate transport system atp-binding protein | EDC56_3202 | Not Available | Positive | 3628839 - 3629498 | 24780.1 |
| phosphonate transport system permease protein | EDC56_3203 | Not Available | Positive | 3629498 - 3630988 | 54325.5 |
| uncharacterized protein yndb with ahsa1/start domain | EDC56_3204 | Not Available | Positive | 3631063 - 3631551 | 18495.5 |
| hypothetical protein | EDC56_3205 | Not Available | Negative | 3631539 - 3632174 | 23839.6 |
| dna polymerase i | EDC56_3206 | Not Available | Negative | 3632365 - 3635151 | 101975.0 |
| homoserine kinase | EDC56_3207 | Not Available | Positive | 3635391 - 3636368 | 36259.7 |
| abc-type zn2+ transport system substrate-binding protein/surface adhesin | EDC56_3208 | Not Available | Negative | 3636440 - 3637288 | 30889.3 |
| fur family zinc uptake transcriptional regulator | EDC56_3209 | Not Available | Positive | 3637355 - 3637846 | 17720.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
