Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-(apurinic or apyrimidinic site) lyase | EDC56_3190 | Not Available | Negative | 3619374 - 3620186 | 29876.5 |
| hypothetical protein | EDC56_3191 | Not Available | Negative | 3620278 - 3620496 | 8068.58 |
| hypothetical protein | EDC56_3192 | Not Available | Negative | 3620523 - 3620681 | 6099.39 |
| thiol:disulfide interchange protein dsba | EDC56_3193 | Not Available | Negative | 3620868 - 3621509 | 23525.4 |
| cytochrome c553 | EDC56_3194 | Not Available | Negative | 3621658 - 3622287 | 21878.2 |
| cytochrome c5 | EDC56_3195 | Not Available | Negative | 3622304 - 3622624 | 11308.7 |
| cell division checkpoint gtpase yiha | EDC56_3196 | Not Available | Positive | 3622736 - 3623380 | 24216.3 |
| protein phna | EDC56_3197 | Not Available | Negative | 3623541 - 3623942 | 15110.1 |
| agcs family alanine or glycine:cation symporter | EDC56_3198 | Not Available | Positive | 3624109 - 3625539 | 50952.0 |
| trna 2-selenouridine synthase | EDC56_3199 | Not Available | Negative | 3625622 - 3626731 | 41871.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
