Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (guanine-n(7)-)-methyltransferase | EDC56_3180 | Not Available | Negative | 3612143 - 3612832 | 26207.5 |
| uncharacterized membrane protein ygdd (tmem256/duf423 family) | EDC56_3181 | Not Available | Negative | 3612844 - 3613218 | 13048.3 |
| rna polymerase rpoh-like sigma 32 subunit | EDC56_3182 | Not Available | Negative | 3613344 - 3614204 | 32218.3 |
| cell division protein ftsx | EDC56_3183 | Not Available | Negative | 3614389 - 3615366 | 35288.3 |
| cell division atp-binding protein ftse | EDC56_3184 | Not Available | Negative | 3615366 - 3616028 | 24470.9 |
| fused signal recognition particle receptor | EDC56_3185 | Not Available | Negative | 3616035 - 3617144 | 39798.6 |
| 16s rrna m(2)g-966 methyltransferase | EDC56_3186 | Not Available | Positive | 3617288 - 3617917 | 23403.8 |
| phosphopantetheine adenylyltransferase | EDC56_3187 | Not Available | Positive | 3618006 - 3618485 | 17881.5 |
| 4fe-4s binding protein | EDC56_3188 | Not Available | Positive | 3618540 - 3618791 | 9418.19 |
| hypothetical protein | EDC56_3189 | Not Available | Negative | 3618848 - 3619210 | 12807.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
