Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroline-5-carboxylate reductase | EDC56_3170 | Not Available | Positive | 3602913 - 3603734 | 28948.5 |
| yggt family protein | EDC56_3171 | Not Available | Positive | 3603824 - 3604414 | 21453.4 |
| homoserine o-acetyltransferase | EDC56_3172 | Not Available | Positive | 3604555 - 3605715 | 43105.8 |
| methionine biosynthesis protein metw | EDC56_3173 | Not Available | Positive | 3605715 - 3606305 | 22714.4 |
| uncharacterized protein duf4426 | EDC56_3174 | Not Available | Positive | 3606337 - 3606813 | 17911.7 |
| xtp/ditp diphosphohydrolase | EDC56_3175 | Not Available | Positive | 3606822 - 3607433 | 22105.0 |
| anaerobic coproporphyrinogen iii oxidase | EDC56_3176 | Not Available | Positive | 3607437 - 3608567 | 41833.6 |
| merr family copper efflux transcriptional regulator/merr family gold-responsive transcriptional activator of gol and ges genes | EDC56_3177 | Not Available | Negative | 3608560 - 3608955 | 14890.1 |
| rna recognition motif-containing protein | EDC56_3178 | Not Available | Negative | 3608958 - 3609299 | 12307.3 |
| cu+-exporting atpase | EDC56_3179 | Not Available | Positive | 3609852 - 3612089 | 79136.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
