Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| twitching motility protein pilj | EDC56_3160 | Not Available | Negative | 3593763 - 3595805 | 72473.5 |
| twitching motility protein pili | EDC56_3161 | Not Available | Negative | 3595861 - 3596403 | 19680.8 |
| twitching motility two-component system response regulator pilh | EDC56_3162 | Not Available | Negative | 3596429 - 3596806 | 13801.7 |
| twitching motility two-component system response regulator pilg | EDC56_3163 | Not Available | Negative | 3596852 - 3597247 | 14358.4 |
| glutathione synthase | EDC56_3164 | Not Available | Positive | 3597398 - 3598441 | 38858.8 |
| protein tonb | EDC56_3165 | Not Available | Positive | 3598460 - 3599347 | 32932.7 |
| putative holliday junction resolvase | EDC56_3166 | Not Available | Positive | 3599372 - 3599791 | 15296.2 |
| twitching motility protein pilu | EDC56_3167 | Not Available | Negative | 3599788 - 3600933 | 42243.9 |
| pilus retraction atpase pilt | EDC56_3168 | Not Available | Negative | 3600983 - 3602017 | 38221.1 |
| hypothetical protein | EDC56_3169 | Not Available | Positive | 3602136 - 3602825 | 25696.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
