Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-serine deaminase-like pyridoxal phosphate-dependent protein | EDC56_3150 | Not Available | Negative | 3578149 - 3579255 | 39826.9 |
| arsr family transcriptional regulator | EDC56_3151 | Not Available | Positive | 3579491 - 3580510 | 38143.1 |
| methionine adenosyltransferase | EDC56_3152 | Not Available | Positive | 3580534 - 3581760 | 44233.1 |
| adenosylhomocysteinase | EDC56_3153 | Not Available | Positive | 3581827 - 3583194 | 49646.2 |
| 5,10-methylenetetrahydrofolate reductase (nad(p)) | EDC56_3154 | Not Available | Positive | 3583442 - 3584272 | 31304.0 |
| 16s rrna (uracil1498-n3)-methyltransferase | EDC56_3155 | Not Available | Positive | 3584321 - 3585046 | 26939.5 |
| chemosensory pili system protein chpc | EDC56_3156 | Not Available | Negative | 3585051 - 3585536 | 17537.0 |
| chemosensory pili system protein chpb (putative protein-glutamate methylesterase) | EDC56_3157 | Not Available | Negative | 3585565 - 3586548 | 35657.7 |
| chemosensory pili system protein chpa (sensor histidine kinase/response regulator) | EDC56_3158 | Not Available | Negative | 3586551 - 3592829 | 229436.0 |
| type iv pilus assembly protein pilk | EDC56_3159 | Not Available | Negative | 3592858 - 3593703 | 31588.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
