Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine synthase | EDC56_3140 | Not Available | Positive | 3565957 - 3566841 | 32299.8 |
| regulator of ribonuclease activity a | EDC56_3141 | Not Available | Positive | 3566981 - 3567535 | 19941.0 |
| f plasmid transfer operon protein traf | EDC56_3142 | Not Available | Negative | 3567537 - 3568907 | 49772.8 |
| 3-hydroxyisobutyrate dehydrogenase/2-hydroxy-3-oxopropionate reductase | EDC56_3143 | Not Available | Negative | 3569669 - 3570532 | 29989.8 |
| alpha-beta hydrolase superfamily lysophospholipase | EDC56_3144 | Not Available | Negative | 3570580 - 3571515 | 36594.0 |
| fructose-bisphosphate aldolase | EDC56_3145 | Not Available | Negative | 3571670 - 3572719 | 37386.7 |
| phosphoglycerate kinase | EDC56_3146 | Not Available | Negative | 3572788 - 3573963 | 40217.3 |
| d-erythrose 4-phosphate dehydrogenase | EDC56_3147 | Not Available | Negative | 3573986 - 3575035 | 38259.7 |
| transketolase | EDC56_3148 | Not Available | Negative | 3575040 - 3577037 | 71270.1 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | EDC56_3149 | Not Available | Negative | 3577204 - 3577962 | 27103.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
