Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mucb/rseb-like sigma(e) regulatory protein | EDC56_0234 | Not Available | Negative | 258845 - 259888 | 38318.0 |
| sigma-e factor negative regulatory protein rsea | EDC56_0235 | Not Available | Negative | 259890 - 260504 | 21645.4 |
| hypothetical protein | EDC56_0236 | Not Available | Negative | 260501 - 260629 | 4811.97 |
| rna polymerase rpoe-like sigma-24 subunit | EDC56_0237 | Not Available | Negative | 260629 - 261216 | 22108.3 |
| l-aspartate oxidase | EDC56_0238 | Not Available | Positive | 261526 - 263172 | 60477.8 |
| hypothetical protein | EDC56_0239 | Not Available | Negative | 263275 - 263811 | 20061.5 |
| antitoxin cptb | EDC56_0240 | Not Available | Negative | 263762 - 264019 | 10123.3 |
| hypothetical protein | EDC56_0241 | Not Available | Positive | 264233 - 265237 | 36438.4 |
| exonuclease sbcc | EDC56_0242 | Not Available | Negative | 265234 - 268929 | 138500.0 |
| exodeoxyribonuclease i subunit d | EDC56_0243 | Not Available | Negative | 268926 - 270170 | 46346.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
